Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/giaa143

https://doi.org/10.1093/gigascience/giaa143

High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant <i>Monomorium pharaonis</i>

Cited by: 7
Author(s): Qionghua Gao, Zijun Xiong, Rasmus Stenbak Larsen, Long Zhang, Jie Zhao, Guo Ding, Ruoping Zhao, Chengyuan Liu, Ran Hao, Guojie Zhang
Published: about 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017