Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/giaa088

https://doi.org/10.1093/gigascience/giaa088

A haplotype-resolved, <i>de novo</i> genome assembly for the wood tiger moth (<i>Arctia plantaginis</i>) through trio binning

Cited by: 16
Author(s): Eugenie C Yen, Shane McCarthy, Juan A. Galarza, Tomas N Generalovic, Sarah Pelan, Petr Nguyen, Joana I. Meier, Ian A. Warren, Johanna Mappes, Richard Durbin, Chris D. Jiggins
Published: over 4 years ago

Software Mentions 5

bioconductor: SNPRelate
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
Papers that mentioned: 204
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: align
Analyzing Linguistic Interaction with Generalizable techNiques. Read the latest ALIGN tutorials.
Papers that mentioned: 80
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562