Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/gigascience/giaa027

https://doi.org/10.1093/gigascience/giaa027

Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C

Cited by: 43
Author(s): Matthew A. Field, Benjamin D. Rosen, Olga Dudchenko, Eva Chan, André E. Minoche, Richard J. Edwards, Kirston Barton, Ruth J. Lyons, Daniel Enosi Tuipulotu, Vanessa M. Hayes, Arina D. Omer, Zane Colaric, Jens Keilwagen, Ksenia Skvortsova, Ozren Bogdanović, Martin A. Smith, E Aiden, Timothy P. L. Smith, Robert A. Zammit, J. William O. Ballard
Published: over 4 years ago

Software Mentions 4

bioconductor: MethylSeekR
Segmentation of Bis-seq data
Papers that mentioned: 33
pypi: Assembly
Assembly is a pythonic object-oriented, mid stack, batteries included framework built on Flask, that adds structure to your Flask application, and group your routes by class.Assembly allows developers to build web applications in much the same way they would build any other object-oriented Python program.Assembly Makes Flask Great Again!
Papers that mentioned: 147
pypi: Extractor
bindings for GNU libextractor, the metadata extractor
Papers that mentioned: 49
pypi: guppy
Guppy-PE -- A Python Programming Environment
Papers that mentioned: 53