Papers: 10.1093/gbe/evy155
https://doi.org/10.1093/gbe/evy155
Pattern of DNA Methylation in Daphnia: Evolutionary Perspective
Cited by: 43
Author(s): Jouni Kvist, Camila Gonçalves Athanásio, Omid Shams Solari, James Brown, John K. Colbourne, Michael E. Pfrender, Leda Mirbahai
Published: about 8 years ago
Software Mentions 4
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
Very Likely Science (100)
bioconductor: methylKit
DNA methylation analysis from high-throughput bisulfite sequencing resultsPapers that mentioned: 154
Very Likely Science (75)
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562
Very Likely Science (100)
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071
Very Likely Science (65)