Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/g3journal/jkab255

https://doi.org/10.1093/g3journal/jkab255

Improved draft reference genome for the Glassy-winged Sharpshooter (<i>Homalodisca vitripennis</i>), a vector for Pierce’s disease

Cited by: 8
Author(s): Cassandra L. Ettinger, Frank J. Byrne, Matthew A. Collin, Derreck Carter-House, Linda L. Walling, Peter W. Atkinson, Rick A Redak, Jason E. Stajich
Published: over 3 years ago

Software Mentions 7

bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: treeio
Base Classes and Functions for Phylogenetic Tree Input and Output
Papers that mentioned: 32
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: tidyverse
Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023
pypi: barrnap
python package for barrnap
Papers that mentioned: 56
pypi: funannotate
funannotate: eukaryotic genome annotation pipeline
Papers that mentioned: 32
pypi: treeio
A pure python parser for tree data format IO
Papers that mentioned: 32