Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/g3journal/jkab104

https://doi.org/10.1093/g3journal/jkab104

Strongyloides RNA-seq Browser: a web-based software platform for on-demand bioinformatics analyses of Strongyloides species

Cited by: 2
Author(s): Astra S. Bryant, Stephanie F. DeMarco, Elissa A. Hallem
Published: over 3 years ago

Software Mentions 11

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: car
Companion to Applied Regression
Papers that mentioned: 1,651
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: DT
A Wrapper of the JavaScript Library 'DataTables'
Papers that mentioned: 74
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: openxlsx
Read, Write and Edit xlsx Files
Papers that mentioned: 35
pypi: car
Papers that mentioned: 1,651
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017