Papers: 10.1093/g3journal/jkaa036

https://doi.org/10.1093/g3journal/jkaa036

Visualizing population structure with variational autoencoders

Cited by: 44
Author(s): C. J. Battey, Gabrielle C. Coffing, Andrew D. Kern
Published: almost 6 years ago

Software Mentions 7

cran: tsne
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
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Uniform Manifold Approximation and Projection
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pypi: msprime
Simulate genealogical trees and genomic sequence data using population genetic models
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pypi: numpy
Fundamental package for array computing in Python
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pypi: scikit-allel
A Python package for exploring and analysing genetic variation data.
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pypi: tsne
TSNE algorithms
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pypi: umap
UNIST synthesis MAP solution
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