Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/dnares/dst017

https://doi.org/10.1093/dnares/dst017

DDBJ Read Annotation Pipeline: A Cloud Computing-Based Pipeline for High-Throughput Analysis of Next-Generation Sequencing Data

Cited by: 69
Author(s): Hideki Nagasaki, Takako Mochizuki, Yuichi Kodama, Satoshi Saruhashi, Shota Morizaki, Hideaki Sugawara, Hajime Ohyanagi, Nori Kurata, Kousaku Okubo, Toshihisa Takagi, Eli Kaminuma, Yasukazu Nakamura
Published: over 11 years ago

Software Mentions 3

cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017