Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/database/baz046

https://doi.org/10.1093/database/baz046

PanglaoDB: a web server for exploration of mouse and human single-cell RNA sequencing data

Cited by: 621
Author(s): Oscar Franzén, Li‐Ming Gan, Johan Björkegren
Published: almost 6 years ago

Software Mentions 8

bioconductor: GENIE3
GEne Network Inference with Ensemble of trees
Papers that mentioned: 172
cran: DescTools
Tools for Descriptive Statistics
Papers that mentioned: 152
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283
cran: meme
Create Meme
Papers that mentioned: 31
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: sfsmisc
Utilities from 'Seminar fuer Statistik' ETH Zurich
Papers that mentioned: 22
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: meme
Use the command line to generate memes on memegenerator.co
Papers that mentioned: 31