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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/database/bay014

https://doi.org/10.1093/database/bay014

TransAtlasDB: an integrated database connecting expression data, metadata and variants

Cited by: 2
Author(s): Modupeore O. Adetunji, Susan J. Lamont, Carl J. Schmidt
Published: over 7 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
Very Likely Science (100)
pypi: perl
Perl as a Python package
Papers that mentioned: 604
Very Likely Science (65)
pypi: pl
UNKNOWN
Papers that mentioned: 99
Very Likely Science (65)
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017
Very Likely Science (90)