Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/biostatistics/kxw055

https://doi.org/10.1093/biostatistics/kxw055

Overcoming confounding plate effects in differential expression analyses of single-cell RNA-seq data

Cited by: 112
Author(s): Aaron T. L. Lun, John C. Marioni
Published: almost 8 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: MAST
Model-based Analysis of Single Cell Transcriptomics
Papers that mentioned: 668
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
pypi: MAST
MAterials Simulation Toolkit
Papers that mentioned: 668
pypi: voom
A python message bus that you can put 4 million volts through.
Papers that mentioned: 136