Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btt016

https://doi.org/10.1093/bioinformatics/btt016

Grape RNA-Seq analysis pipeline environment

Cited by: 28
Author(s): David G. Knowles, Maik Röder, Angelika Merkel, Roderic Guigó
Published: almost 12 years ago

Software Mentions 5

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: GEM
GEM: fast association study for the interplay of Gene, Environment and Methylation
Papers that mentioned: 317
cran: GRAPE
Gene-Ranking Analysis of Pathway Expression
Papers that mentioned: 24
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: FluxCapacitor
Lets you travel through time!
Papers that mentioned: 8