Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1093/bioinformatics/btaa838
https://doi.org/10.1093/bioinformatics/btaa838
<i>MicrobiomeExplorer</i>: an R package for the analysis and visualization of microbial communities
Cited by: 16
Author(s): Janina Reeder, Mo Huang, Joshua S. Kaminker, Joseph N. Paulson
Published: about 4 years ago
Software Mentions 9
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencingPapers that mentioned: 169
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: metaviz
Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-AnalysisPapers that mentioned: 9
pypi: metaviz
Metabolic pathway visualisation using BioCyc API and GraphVizPapers that mentioned: 9
pypi: plotly
An open-source, interactive data visualization library for PythonPapers that mentioned: 163