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Papers: 10.1093/bioinformatics/btaa838

https://doi.org/10.1093/bioinformatics/btaa838

<i>MicrobiomeExplorer</i>: an R package for the analysis and visualization of microbial communities

Cited by: 16
Author(s): Janina Reeder, Mo Huang, Joshua S. Kaminker, Joseph N. Paulson
Published: over 4 years ago

Software Mentions 9

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
Papers that mentioned: 169
Very Likely Science (100)
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
Very Likely Science (75)
cran: metaviz
Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis
Papers that mentioned: 9
Very Likely Science (100)
cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
Very Likely Science (100)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
pypi: metaviz
Metabolic pathway visualisation using BioCyc API and GraphViz
Papers that mentioned: 9
Very Likely Science (75)
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163
Very Likely Science (90)