Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1093/bioinformatics/btaa202

https://doi.org/10.1093/bioinformatics/btaa202

HiChIP-Peaks: a HiChIP peak calling algorithm

Cited by: 10
Author(s): Chenfu Shi, Magnus Rattray, Gisela Orozco
Published: over 4 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: Servant
Python 3 asyncio web server
Papers that mentioned: 2