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Papers: 10.1093/bib/bbv049

https://doi.org/10.1093/bib/bbv049

Empirical comparison of structure-based pathway methods

Cited by: 24
Author(s): Maria K. Jaakkola, Laura L. Elo
Published: about 10 years ago

Software Mentions 4

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
Very Likely Science (83)
bioconductor: ROTS
Reproducibility-Optimized Test Statistic
Papers that mentioned: 20
Very Likely Science (90)
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
Very Likely Science (100)
cran: CePa
Centrality-Based Pathway Enrichment
Papers that mentioned: 22
Very Likely Science (87)