Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1084/jem.20210615
https://doi.org/10.1084/jem.20210615
Cited by: 63
Author(s): Davide Pisu, Lu Huang, Vipin Narang, Monique E. Theriault, Gabrielle Lê-Bury, Bernett Lee, Agnes E Lakudzala, David Mzinza, David V. Mhango, Steven C Mitini-Nkhoma, Kondwani Jambo, Amit Singhal, Henry C. Mwandumba, David G. Russell
Published: almost 3 years ago
Software Mentions 8
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)Papers that mentioned: 989
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071