Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1080/19490976.2021.1966263

https://doi.org/10.1080/19490976.2021.1966263

Deprivation of dietary fiber in specific-pathogen-free mice promotes susceptibility to the intestinal mucosal pathogen <i>Citrobacter rodentium</i>

Cited by: 28
Author(s): Mareike Neumann, Alex Steimle, Erica T. Grant, Mathis Wolter, Amy Parrish, Stéphanie Willième, Dirk Brenner, Eric C. Martens, Mahesh S. Desai
Published: almost 4 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: forcats
Tools for Working with Categorical Variables (Factors)
Papers that mentioned: 33
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: forcats
Tools for working with pandas categoricals
Papers that mentioned: 33
pypi: Zen
A simple way to access the ZenDesk v2 API via Python.
Papers that mentioned: 2,767