Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/srep44736

https://doi.org/10.1038/srep44736

Vector Integration Sites Identification for Gene-Trap Screening in Mammalian Haploid Cells

Cited by: 5
Author(s): Jian Yu, Constance Ciaudo
Published: over 7 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: subSeq
Subsampling of high-throughput sequencing count data
Papers that mentioned: 3
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555