Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/srep41531

https://doi.org/10.1038/srep41531

Transcriptomic analysis of common carp anterior kidney during Cyprinid herpesvirus 3 infection: Immunoglobulin repertoire and homologue functional divergence

Cited by: 23
Author(s): Matthew J. Neave, Agus Sunarto, Kenneth A. McColl
Published: almost 8 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: matplotlib-venn
Functions for plotting area-proportional two- and three-way Venn diagrams in matplotlib.
Papers that mentioned: 5
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017