Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/sdata.2016.131

https://doi.org/10.1038/sdata.2016.131

De novo transcriptome assemblies of four accessions of the metal hyperaccumulator plant Noccaea caerulescens

Cited by: 28
Author(s): Daniel Blande, Pauliina Halimaa, Arja Tervahauta, Mark G. M. Aarts, Sirpa Kärenlampi
Published: over 7 years ago

Software Mentions 5

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: muscle3
Version 3 of the MUltiScale Coupling Library and Environment
Papers that mentioned: 4
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213