Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s42003-021-02397-3

https://doi.org/10.1038/s42003-021-02397-3

Three-dimensional CRISPR screening reveals epigenetic interaction with anti-angiogenic therapy

Cited by: 4
Author(s): Michael Y. He, Michael M. Halford, Ruofei Liu, James P Roy, Zoe L. Grant, Leigh Coultas, Niko Thio, Omer Gilan, Yih Chih Chan, Mark A. Dawson, Marc G. Achen, Steven A. Stacker
Published: over 3 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: CellProfiler

Papers that mentioned: 1,504
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071