Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-021-98542-3

https://doi.org/10.1038/s41598-021-98542-3

A differential DNA methylome signature of pulmonary immune cells from individuals converting to latent tuberculosis infection

Cited by: 11
Author(s): Lovisa Karlsson, Jyotirmoy Das, Moa Nilsson, Amanda Tyrén, Isabelle Pehrson, Nina Idh, Shumaila Sayyab, Jakob Paues, César Ugarte-Gil, Melissa Méndez-Aranda, Maria Lerm
Published: about 3 years ago

Software Mentions 9

bioconductor: AnnotationDbi
Manipulation of SQLite-based annotations in Bioconductor
Papers that mentioned: 73
bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing data
Papers that mentioned: 331
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: dendextend
Extending 'dendrogram' Functionality in R
Papers that mentioned: 201
cran: ggpubr
'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918