Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-021-96966-5

https://doi.org/10.1038/s41598-021-96966-5

Molecular characterization and cell type composition deconvolution of fibrosis in NAFLD

Cited by: 26
Author(s): Lorena Pantano, George Agyapong, Yang Shen, Zhuo Zhu, Francesc Fernández-Albert, Werner Rust, Dagmar Knebel, Jon Hill, Carine M. Boustany-Kari, Julia F. Doerner, Jörg F. Rippmann, Raymond T. Chung, Shannan Ho Sui, Eric J. Simon, Kathleen E. Corey
Published: about 3 years ago

Software Mentions 5

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759