Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-019-52148-y

https://doi.org/10.1038/s41598-019-52148-y

Impacts of Maize Domestication and Breeding on Rhizosphere Microbial Community Recruitment from a Nutrient Depleted Agricultural Soil

Cited by: 64
Author(s): Vanessa Brisson, Jennifer E. Schmidt, Trent Northen, John P. Vogel, Amélie C. M. Gaudin
Published: about 5 years ago

Software Mentions 6

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: phyloseq

Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702

cran: indicspecies

Relationship Between Species and Groups of Sites
Papers that mentioned: 218

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: cutadapt

Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562