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Papers: 10.1038/s41598-019-41315-w

https://doi.org/10.1038/s41598-019-41315-w

Novel Data Transformations for RNA-seq Differential Expression Analysis

Cited by: 23
Author(s): Zeyu Zhang, Danyang Yu, Minseok Seo, Craig P. Hersh, Scott T. Weiss, Weiliang Qiu
Published: over 6 years ago

Software Mentions 6

bioconductor: baySeq
Empirical Bayesian analysis of patterns of differential expression in count data
Papers that mentioned: 139
Very Likely Science (100)
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
Very Likely Science (91)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
pypi: sleuth
Papers that mentioned: 59
Very Likely Science (65)