Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-018-32973-3

https://doi.org/10.1038/s41598-018-32973-3

Patients with Chronic Obstructive Pulmonary Disease harbour a variation of Haemophilus species

Cited by: 13
Author(s): Karen L. Osman, Johanna M.C. Jefferies, Christopher H. Woelk, Nathalie Devos, Thierry Pascal, Marie-Cécile Mortier, Jeanne-Marie Devaster, Tom Wilkinson, David W. Cleary, Stuart C. Clarke
Published: about 6 years ago

Software Mentions 2

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306

pypi: pyani

pyani provides a package and script for calculation of genome-scale average nucleotide identity.
Papers that mentioned: 120