Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-018-31780-0

https://doi.org/10.1038/s41598-018-31780-0

DNA hypermethylation and differential gene expression associated with Klinefelter syndrome

Cited by: 67
Author(s): Anne Skakkebæk, Morten Muhlig Nielsen, Christian Trolle, Søren Vang, Henrik Hornshøj, Jakob Hedegaard, Mikkel Wallentin, Anders Bojesen, Jens Michael Hertz, Jens Fedder, John R. Østergaard, Jakob Skou Pedersen, Claus Højbjerg Gravholt
Published: about 6 years ago

Software Mentions 9

bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: DMRcate
Methylation array and sequencing spatial analysis methods
Papers that mentioned: 132
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: ggbio
Visualization tools for genomic data
Papers that mentioned: 53
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: knitr
A General-Purpose Package for Dynamic Report Generation in R
Papers that mentioned: 157