Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-018-27912-1

https://doi.org/10.1038/s41598-018-27912-1

Expression ratio of the TGFβ-inducible gene MYO10 is prognostic for overall survival of squamous cell lung cancer patients and predicts chemotherapy response

Cited by: 11
Author(s): Dmytro Dvornikov, Marc A. Schneider, Sebastian Ohse, Magdalena Szczygieł, I. Titkova, Marcus Rosenblatt, Thomas Muley, Arne Warth, Felix Herth, Hendrik Dienemann, Michael Thomas, Jens Timmer, Marcel Schilling, Hauke Busch, Melanie Boerries, Michael Meister, Ursula Klingmüller
Published: over 6 years ago

Software Mentions 3

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307