Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-017-12084-1

https://doi.org/10.1038/s41598-017-12084-1

DNA Methylomes Reveal Biological Networks Involved in Human Eye Development, Functions and Associated Disorders

Cited by: 36
Author(s): María Berdasco, Antonio Gómez, Marc Rubio, Jaume Català‐Mora, Vicente Zanón‐Moreno, Miguel López, Cristina Hernández, Shigeo Yoshida, Takahito Nakama, Keijiro Ishikawa, Tatsuro Ishibashi, Amina Boubekeur, Lotfi Louhibi, Miguel Ángel Pujana, Sergi Sayols, Fernando Setién, Dolores Corella, Carmen de Torres, Andreu Parareda, Ling Zhao, Kang Zhang, Matilde E. Lleonart, Javier Alonso, Rafael Simó, Josep M. Caminal, Manel Esteller
Published: about 7 years ago

Software Mentions 3

bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: minfi
Analyze Illumina Infinium DNA methylation arrays
Papers that mentioned: 506
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138