Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-017-11807-8

https://doi.org/10.1038/s41598-017-11807-8

Genomic and transcriptomic analysis of the toluene degrading black yeast Cladophialophora immunda

Cited by: 36
Author(s): Barbara Blasi, Hakim Tafer, Christina Kustor, Caroline Poyntner, Ksenija Lopandić, Katja Sterflinger
Published: over 7 years ago

Software Mentions 5

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
pypi: snakemake
Workflow management system to create reproducible and scalable data analyses
Papers that mentioned: 45