Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41598-017-10471-2

https://doi.org/10.1038/s41598-017-10471-2

Impact of Immunosuppression on the Metagenomic Composition of the Intestinal Microbiome: a Systems Biology Approach to Post-Transplant Diabetes

Cited by: 44
Author(s): Mamatha Bhat, Elisa Pasini, John W. Copeland, Marc Angeli, Shahid Husain, Deepali Kumar, Eberhard L. Renner, Anastasia Teterina, Johane P. Allard, David S. Guttman, Atul Humar
Published: about 7 years ago

Software Mentions 2

pypi: MetaPhlAn

MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306

pypi: STAMP

A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190