Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1038/s41598-017-06665-3
https://doi.org/10.1038/s41598-017-06665-3
Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing
Cited by: 152
Author(s): Michael Tessler, Johannes S. Neumann, Ebrahim Afshinnekoo, Michael Pineda, Rebecca Hersch, Luiz Felipe Machado Velho, Bianca Trevizan Segóvia, Fábio Amodêo Lansac‐Tôha, Michael Lemke, Rob DeSalle, Christopher E. Mason, Mercer R. Brugler
Published: over 7 years ago
Software Mentions 3
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and PermutationsPapers that mentioned: 6,292
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306