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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1038/s41597-021-00809-x

https://doi.org/10.1038/s41597-021-00809-x

A multi-center cross-platform single-cell RNA sequencing reference dataset

Cited by: 14
Author(s): Xin Chen, Zujun Yang, Wanqiu Chen, Yongmei Zhao, Andrew Farmer, Bao Tran, Vyacheslav Furtak, Malcolm Moos, Wenming Xiao, Charles Wang
Published: over 4 years ago

Software Mentions 7

bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
Very Likely Science (100)
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504
Very Likely Science (65)
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
Very Likely Science (100)
pypi: umi-tools
umi_tools: Tools for UMI analyses
Papers that mentioned: 3
Very Likely Science (100)