Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41597-020-0556-x

https://doi.org/10.1038/s41597-020-0556-x

Chromatin accessibility and transcriptome landscapes of Monomorium pharaonis brain

Cited by: 9
Author(s): Mingyue Wang, Yang Liu, Tinggang Wen, Weiwei Liu, Qionghua Gao, Jie Zhao, Zijun Xiong, Zhifeng Wang, Wei Jiang, Yeya Yu, Liang Wu, Yue Yuan, Xiaoyü Wei, Jiangshan Xu, Mengnan Cheng, Pei Zhang, Panyi Li, Yong Hou, Huanming Yang, Guojie Zhang, Qiye Li, Chuanyu Liu, Longqi Liu
Published: over 4 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203