Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41597-020-00719-4

https://doi.org/10.1038/s41597-020-00719-4

Paired rRNA-depleted and polyA-selected RNA sequencing data and supporting multi-omics data from human T cells

Cited by: 11
Author(s): Li Chen, Ruirui Yang, Tony Kwan, Chao Tang, Stephen Watt, Yiming Zhang, Guillaume Bourque, Bing Ge, Kate Downes, Mattia Frontini, Willem H. Ouwehand, Jing-wen Lin, Nicole Soranzo, Tomi Pastinen, Ciyong Lu
Published: about 4 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366