Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41420-021-00567-0

https://doi.org/10.1038/s41420-021-00567-0

Single-cell RNA-seq reveals cellular heterogeneity of mouse carotid artery under disturbed flow

Cited by: 22
Author(s): Fengchan Li, Kunmin Yan, Lili Wu, Zhong Zheng, Yinan Du, Ziting Liu, Luyao Zhao, Wei Li, Yulan Sheng, Luping Ren, Chaojun Tang, Li Zhu
Published: over 3 years ago

Software Mentions 6

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
cran: DDRTree
Learning Principal Graphs with DDRTree
Papers that mentioned: 42
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893