Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41419-020-2303-9

https://doi.org/10.1038/s41419-020-2303-9

Acetate supplementation restores chromatin accessibility and promotes tumor cell differentiation under hypoxia

Cited by: 32
Author(s): Yang Li, Joshua J. Gruber, Ulrike M. Litzenburger, Yiren Zhou, Yu Miao, Edward L. LaGory, Albert M. Li, Zhen Hu, Michaela Yip, Lori S. Hart, John M. Maris, Howard Y. Chang, Amato J. Giaccia, Jiangbin Ye
Published: almost 5 years ago

Software Mentions 3

pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203