Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41396-021-00940-y

https://doi.org/10.1038/s41396-021-00940-y

Locally adapted gut microbiomes mediate host stress tolerance

Cited by: 28
Author(s): Shira Houwenhuyse, Robby Stoks, Shinjini Mukherjee, Ellen Decaestecker
Published: over 3 years ago

Software Mentions 10

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: car
Companion to Applied Regression
Papers that mentioned: 1,651
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: car
Papers that mentioned: 1,651
pypi: Silva
Silva Content Management System
Papers that mentioned: 445
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690