Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41396-020-00749-1

https://doi.org/10.1038/s41396-020-00749-1

Activity-based cell sorting reveals responses of uncultured archaea and bacteria to substrate amendment

Cited by: 37
Author(s): Nicholas J. Reichart, Zackary J. Jay, Viola Krukenberg, Albert E. Parker, Rachel L. Spietz, Roland Hatzenpichler
Published: over 4 years ago

Software Mentions 6

bioconductor: decontam
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data
Papers that mentioned: 76
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: decontam
Decontaminate paired-end DNA sequencing data
Papers that mentioned: 76