Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41392-021-00753-7

https://doi.org/10.1038/s41392-021-00753-7

Cited by: 18
Author(s): Xiang-Na Zhao, Yue You, Xiaoming Cui, Han Gao, Guolin Wang, Shengbo Zhang, Lilin Ye, Lei Duan, Ka-Li Zhu, Yuling Wang, Li Li, Jianhua Lu, Haibin Wang, Jingfang Fan, Huanwei Zheng, Erfu Dai, Luyi Tian, Mai‐Juan Ma
Published: over 2 years ago

Software Mentions 11

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: Mfuzz

Soft clustering of time series gene expression data
Papers that mentioned: 160

bioconductor: SingleR

Reference-Based Single-Cell RNA-Seq Annotation
Papers that mentioned: 97

bioconductor: topGO

Enrichment Analysis for Gene Ontology
Papers that mentioned: 652

cran: alakazam

Immunoglobulin Clonal Lineage and Diversity Analysis
Papers that mentioned: 6

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggpubr

'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: Seurat

Tools for Single Cell Genomics
Papers that mentioned: 1,512

pypi: alakazam

Functional programming sugar for Python
Papers that mentioned: 6

pypi: scatter

Implementable distributed computing engine for python
Papers that mentioned: 2