Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1038/s41375-020-0856-3

https://doi.org/10.1038/s41375-020-0856-3

Contribution of CTCF binding to transcriptional activity at the HOXA locus in NPM1-mutant AML cells

Cited by: 19
Author(s): Reza Ghasemi, Heidi Struthers, Elisabeth R. Wilson, David H. Spencer
Published: over 4 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: GenomicInteractions
Utilities for handling genomic interaction data
Papers that mentioned: 10
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: HiTC
High Throughput Chromosome Conformation Capture analysis
Papers that mentioned: 21
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759