Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.stem.2020.11.015

https://doi.org/10.1016/j.stem.2020.11.015

Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Human Developmental Hematopoiesis

Cited by: 152
Author(s): Anna Maria Ranzoni, Andrea Tangherloni, Ivan Berest, Simone G. Riva, Brynelle Myers, Paulina M. Strzelecka, Jiarui Xu, Elisa Panada, Irina Mohorianu, Judith B. Zaugg, Ana Cvejic
Published: over 3 years ago

Software Mentions 7

bioconductor: chromVAR
Chromatin Variation Across Regions
Papers that mentioned: 46
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: Signac
Analysis of Single-Cell Chromatin Data
Papers that mentioned: 24
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: fa2
The fastest ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 1
pypi: ForceAtlas2
The ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 92
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504