Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1016/j.molcel.2021.03.013
https://doi.org/10.1016/j.molcel.2021.03.013
Cited by: 17
Author(s): Amy Tresenrider, Kaitlin Morse, Victoria Jorgensen, Minghao Chia, Hanna Liao, Folkert J. van Werven, Elçin Ünal
Published: about 3 years ago
Software Mentions 7
bioconductor: CAGEr
Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome miningPapers that mentioned: 27
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
pypi: Assembly
Assembly is a pythonic object-oriented, mid stack, batteries included framework built on Flask, that adds structure to your Flask application, and group your routes by class.Assembly allows developers to build web applications in much the same way they would build any other object-oriented Python program.Assembly Makes Flask Great Again!Papers that mentioned: 147
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562