Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.molcel.2020.04.008

https://doi.org/10.1016/j.molcel.2020.04.008

Single-Cell Analyses Reveal Megakaryocyte-Biased Hematopoiesis in Myelofibrosis and Identify Mutant Clone-Specific Targets

Cited by: 101
Author(s): Bethan Psaila, Guanlin Wang, Alba Rodríguez-Meira, Rong Li, Elisabeth F. Heuston, Lauren C. Murphy, Daniel Yee, Ian S. Hitchcock, Nikolaos Sousos, Jennifer O’Sullivan, Stacie M. Anderson, Yotis A. Senis, Olga K. Weinberg, Monica L. Calicchio, Deena Iskander, Daniel Royston, Dragana Milojković, Irene Roberts, David M. Bodine, Supat Thongjuea, Adam J. Mead
Published: over 4 years ago

Software Mentions 9

bioconductor: AUCell
AUCell: Analysis of 'gene set' activity in single-cell RNA-seq data (e.g. identify cells with specific gene signatures)
Papers that mentioned: 45
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: statmod
Statistical Modeling
Papers that mentioned: 55
pypi: ForceAtlas2
The ForceAtlas2 algorithm for Python (and NetworkX)
Papers that mentioned: 92
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: scanpy
Single-Cell Analysis in Python.
Papers that mentioned: 68