Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.molcel.2018.11.006

https://doi.org/10.1016/j.molcel.2018.11.006

Cited by: 117
Author(s): Jean-Philippe Lambert, S. Picaud, Takao Fujisawa, Huayun Hou, P. Savitsky, Liis Uusküla-Reimand, Gagan D. Gupta, Hala Abdouni, Zhen‐Yuan Lin, Monika Tucholska, James D.R. Knight, Beatriz Gonzalez-Badillo, Nicole St‐Denis, Joseph A. Newman, Manuel Stucki, Laurence Pelletier, Nuno Bandeira, Michael D. Wilson, P. Filippakopoulos, Anne‐Claude Gingras
Published: over 5 years ago

Software Mentions 9

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
cran: SPOT
Sequential Parameter Optimization Toolbox
Papers that mentioned: 551
pypi: BioID
A python package for autonomously identifying Bioinformatic file formats.
Papers that mentioned: 208
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
pypi: Comet
VOEvent Broker
Papers that mentioned: 248
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: PyMOL

Papers that mentioned: 8,266