Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1016/j.celrep.2016.03.015
https://doi.org/10.1016/j.celrep.2016.03.015
Metagenomic Sequencing with Strain-Level Resolution Implicates Uropathogenic E. coli in Necrotizing Enterocolitis and Mortality in Preterm Infants
Cited by: 136
Author(s): Doyle V. Ward, Matthias Scholz, Moreno Zolfo, Diana H. Taft, Kurt Schibler, Adrian Tett, Nicola Segata, Ardythe L. Morrow
Published: over 8 years ago
Software Mentions 2
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306
pypi: PhyloPhlAn
Precise phylogenetic analysis of microbial isolates and genomes from metagenomesPapers that mentioned: 144