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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1007/s13238-020-00724-8

https://doi.org/10.1007/s13238-020-00724-8

A practical guide to amplicon and metagenomic analysis of microbiome data

Cited by: 311
Author(s): Yong‐Xin Liu, Yuan Qin, Tong Chen, Meiping Lu, Xubo Qian, Xiaoxuan Guo, Yang Bai
Published: about 5 years ago

Software Mentions 9

bioconductor: ALDEx2
Analysis Of Differential Abundance Taking Sample and Scale Variation Into Account
Papers that mentioned: 136
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: FEAST
FEAture SelcTion (FEAST) for Single-cell clustering
Papers that mentioned: 87
Very Likely Science (100)
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
Very Likely Science (100)
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
Very Likely Science (85)
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
Very Likely Science (100)
pypi: conda
OS-agnostic, system-level binary package manager.
Papers that mentioned: 92
Very Likely Science (100)
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
Very Likely Science (100)
pypi: STAMP
A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190
Very Likely Science (65)