Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1002/1878-0261.12954

https://doi.org/10.1002/1878-0261.12954

The evolutionarily conserved long non‐coding RNA <i>LINC00261</i> drives neuroendocrine prostate cancer proliferation and metastasis <i>via</i> distinct nuclear and cytoplasmic mechanisms

Cited by: 21
Author(s): Rebecca Mather, Abhijit Parolia, Sandra E. Carson, Erik Venalainen, David Roig-Carles, Mustapha Jaber, Shih‐Chun Chu, Ilaria Alborelli, Rebecca Wu, Dong Lin, Noushin Nabavi, Elena Jachetti, Mario P. Colombo, Hui Xue, Perla Pucci, Xinpei Ci, Cheryl A. Hawkes, Yinglei Li, Hardev Pandha, Igor Ulitsky, Crystal N. Marconett, Luca Quagliata, Wei Jiang, Ignacio A. Romero, Yuzhuo Wang, Francesco Crea
Published: over 3 years ago

Software Mentions 6

bioconductor: ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome ranges
Papers that mentioned: 145
bioconductor: ChIPseeker
ChIPseeker for ChIP peak Annotation, Comparison, and Visualization
Papers that mentioned: 161
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: genetools
General genetics/genomics utilities.
Papers that mentioned: 3
pypi: imagej
Python wrapper for ImageJ
Papers that mentioned: 467
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203