Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1002/1878-0261.12923

https://doi.org/10.1002/1878-0261.12923

Epigenetic and transcriptional analysis reveals a core transcriptional program conserved in clonal prostate cancer metastases

Cited by: 8
Author(s): Tesa Severson, Yanyun Zhu, Angelo M. De Marzo, Tracy Jones, Jonathan W. Simons, William G. Nelson, Srinivasan Yegnasubramanian, Matthew L. Freedman, Lodewyk F.A. Wessels, Andries M. Bergman, Michael C. Haffner, Wilbert Zwart
Published: over 3 years ago

Software Mentions 7

bioconductor: clusterProfiler
A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DOSE
Disease Ontology Semantic and Enrichment analysis
Papers that mentioned: 138
cran: AR
Another Look at the Acceptance-Rejection Method
Papers that mentioned: 533
cran: PerformanceAnalytics
Econometric Tools for Performance and Risk Analysis
Papers that mentioned: 93
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: PerformanceAnalytics
A port of R's performance analytics to python
Papers that mentioned: 93