Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1002/1878-0261.12435
https://doi.org/10.1002/1878-0261.12435
Detection of human papillomavirus in cases of head and neck squamous cell carcinoma by RNA‐seq and VirTect
Cited by: 7
Author(s): Atlas Khan, Qian Liu, Xuelian Chen, Andres Stucky, Parish P. Sedghizadeh, Daniel Adelpour, Xi Zhang, Kai Wang, Jiang Zhong
Published: over 5 years ago
Software Mentions 6
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071
pypi: igv
Jupyter extension for embedding the genome visualation igv.js in a notebookPapers that mentioned: 16